BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016C10LP1|AL426986
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1007 1717 0.0
>3x_Contig1007
Length = 3570
Score = 1717 bits (865), Expect = 0.0
Identities = 874/877 (99%), Gaps = 1/877 (0%)
Strand = Plus / Minus
Query: 1 aaatgttaccaacgtctaaagcagaacgaccttctaattgatatgaccgatataactgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1857 aaatgttaccaacgtctaaagcagaacgaccttctaattgatatgaccgatataactgca 1798
Query: 61 gtcataaatattgcaagagatagattctcagactctatcggagctcctaaaattcctaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1797 gtcataaatattgcaagagatagattctcagactctatcggagctcctaaaattcctaac 1738
Query: 121 gtgacttgggatgatattggtgggatggatgtggtcaaaggagaaatcatggataccata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1737 gtgacttgggatgatattggtgggatggatgtggtcaaaggagaaatcatggataccata 1678
Query: 181 gatatgccactcaagcaccctgaactattttcatctggtatgaaaaagagaagtggtatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1677 gatatgccactcaagcaccctgaactattttcatctggtatgaaaaagagaagtggtatt 1618
Query: 241 cttttctatggacctcctgggactggtaaaaccttgttagcgaaggcaattgcgtctaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1617 cttttctatggacctcctgggactggtaaaaccttgttagcgaaggcaattgcgtctaac 1558
Query: 301 ttctctttaaattttttcagtgttaaagggcctgaacttcttaacatgtacattggtgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1557 ttctctttaaattttttcagtgttaaagggcctgaacttcttaacatgtacattggtgaa 1498
Query: 361 tccgaggcaaatgttagacgtgtcttccagaaagcaagagatgctaagccatgtgtcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1497 tccgaggcaaatgttagacgtgtcttccagaaagcaagagatgctaagccatgtgtcatt 1438
Query: 421 tttttcgatgaacttgattccgtggcaccaaagagaggaaatcagggagattctgggggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1437 tttttcgatgaacttgattccgtggcaccaaagagaggaaatcagggagattctgggggt 1378
Query: 481 gttatggatcgtattgtgtctcaacttttggcagaactagacggaatgagttcaggagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 gttatggatcgtattgtgtctcaacttttggcagaactagacggaatgagttcaggagga 1318
Query: 541 gacggagtgttcgtaattggagctacgaataggccagatcttcttgatgaagcattatta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 gacggagtgttcgtaattggagctacgaataggccagatcttcttgatgaagcattatta 1258
Query: 601 cgtcccggtaggtttgacaagatgttatatttggggatatcagataccgataaaaaacar 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 cgtcccggtaggtttgacaagatgttatatttggggatatcagataccgataaaaaacag 1198
Query: 661 gcaaatatcatcaaggctttgacgagaaagttcacactagaatctggtatcgatatacta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 gcaaatatcatcaaggctttgacgagaaagttcacactagaatctggtatcgatatacta 1138
Query: 721 gatattgccaaaaaatgtccgttcaactatacaggtgcagatttctacgcattgtgttct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 gatattgccaaaaaatgtccgttcaactatacaggtgcagatttctacgcattgtgttct 1078
Query: 781 gatgcccttttaaacgctatgactagagttgctggtgaagttgatgaaaagtgggagaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 gatgcccttttaaacgctatgactagagttgctggtgaagttgatgaaaagtgggagaag 1018
Query: 841 tataacatggaaaaataaaaaraatatatcattgagg 877
|||||||||| |||||||||| |||||||||||||||
Sbjct: 1017 tataacatgg-aaaataaaaagaatatatcattgagg 982
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6346
Number of Sequences: 1807
Number of extensions: 6346
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)